ENST00000488699.5 SLAIN1

Information
Transcript ID
ENST00000488699.5
Genome
hg19
Position
chr13:78,273,016-78,337,492
Strand
+
CDS length
1,281
Amino acid length
427
Gene symbol
SLAIN1
Gene type
protein-coding
Gene description
SLAIN motif family member 1
Gene Entrez Gene ID
122060
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 78,273,016 78,273,192
2 78,293,667 78,293,806
3 78,318,418 78,318,567
4 78,320,649 78,320,990
5 78,327,338 78,327,493
6 78,334,963 78,335,245
7 78,337,280 78,337,492
CDS
Exon number Type Start Stop
1 CDS 78,273,059 78,273,192
2 CDS 78,293,667 78,293,806
3 CDS 78,318,418 78,318,567
4 CDS 78,320,649 78,320,990
5 CDS 78,327,338 78,327,493
6 CDS 78,334,963 78,335,245
7 CDS 78,337,280 78,337,355
Other genome
Genome Chromosome Start End Links
hg38 chr13 77,698,881 77,763,357 Link
CDS sequence
ATGGTAGGGGTTGGCCTCTGTCTGCGACTGTTACTGTTCTTTCGTTTTAAACGAACGCTGGACAGGATTTGCGTGCTCTTCCTCCTCGGGTGGCATCGGAAGCCGCGCAGTGATGGATCTCTCTTTATAGAGAGGTTATACATTGGCTCTTCAAAGACGTTCACCTCATCAGAGAAATCCCTGACTCCTTTGCAGTGGTGTAGACATGTCCTAGATAACCCAACTCCTGAGATGGAAGCAGCGAGACGTTCCCTGTGCTTTAGACTGGAGCAAGGTTACACTTCCAGGGGCTCCCCACTCAGTCCCCAGTCATCTATCGACAGTGAGCTGAGTACTTCAGAATTGGAGGATGATTCTATCTCCATGGGATATAAATTACAGGACCTCACTGATGTTCAGATCATGGCTCGTCTGCAAGAAGAAAGTCTCAGGCAAGATTATGCTTCTACTTCAGCATCTGTATCAAGACATAGTTCCAGTGTGTCATTGAGTTCAGGAAAAAAAGGGACATGTAGTGATCAAGAATATGACCAATACAGTCTGGAGGATGAAGAGGAATTTGATCATTTGCCACCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTAGGAGGAGCCCCAGTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGCAACAGTATTATTCACCTCAAGCCCAAACTCCAGATCAGCAACCAAATAGGACCAATGGAGATAAGCTCCGAAGAAGTATGCCTAACCTAGCCCGGATGCCAAGTACAACTGCCATTAGTAGCAACATTAGTTCTCCGGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGGAATTTCAAGAATACAATCTTGTATTCCATCACCGGGACAGCTTCAACACAGGGTCCACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAGCCTCTTAAAGCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTATCAAACGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCTCTGTCTTCACTCAGCACTCTGAGGGATGGAAATTGGAGAGATGGTTGCTACTAA
Amino sequence
MVGVGLCLRLLLFFRFKRTLDRICVLFLLGWHRKPRSDGSLFIERLYIGSSKTFTSSEKSLTPLQWCRHVLDNPTPEMEAARRSLCFRLEQGYTSRGSPLSPQSSIDSELSTSELEDDSISMGYKLQDLTDVQIMARLQEESLRQDYASTSASVSRHSSSVSLSSGKKGTCSDQEYDQYSLEDEEEFDHLPPPQPRLPRCSPFQRGIPHSQTFSSIRECRRSPSSQYFPSNNYQQQQYYSPQAQTPDQQPNRTNGDKLRRSMPNLARMPSTTAISSNISSPVTVRNSQSFDSSLHGAGNGISRIQSCIPSPGQLQHRVHSVGHFPVSIRQPLKATAYVSPTVQGSSNMPLSNGLQLYSNTGIPTPNKAAASGIMGRSALPRPSLAINGSNLPRSKIAQPVRSFLQPPKPLSSLSTLRDGNWRDGCY*