ENST00000301364.10 TSR1

Information
Transcript ID
ENST00000301364.10
Genome
hg19
Position
chr17:2,225,690-2,239,751
Strand
-
CDS length
2,415
Amino acid length
805
Gene symbol
TSR1
Gene type
protein-coding
Gene description
TSR1 ribosome maturation factor
Gene Entrez Gene ID
55720
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
15 2,225,690 2,227,668
14 2,227,798 2,227,872
13 2,227,983 2,228,123
12 2,228,598 2,228,714
11 2,232,637 2,232,769
10 2,233,809 2,233,919
9 2,234,241 2,234,403
8 2,235,463 2,235,653
7 2,236,255 2,236,418
6 2,236,851 2,237,010
5 2,237,766 2,238,190
4 2,238,554 2,238,688
3 2,238,805 2,239,024
2 2,239,331 2,239,434
1 2,239,625 2,239,751
CDS
Exon number Type Start Stop
15 CDS 2,227,490 2,227,668
14 CDS 2,227,798 2,227,872
13 CDS 2,227,983 2,228,123
12 CDS 2,228,598 2,228,714
11 CDS 2,232,637 2,232,769
10 CDS 2,233,809 2,233,919
9 CDS 2,234,241 2,234,403
8 CDS 2,235,463 2,235,653
7 CDS 2,236,255 2,236,418
6 CDS 2,236,851 2,237,010
5 CDS 2,237,766 2,238,190
4 CDS 2,238,554 2,238,688
3 CDS 2,238,805 2,239,024
2 CDS 2,239,331 2,239,434
1 CDS 2,239,625 2,239,721
Other genome
Genome Chromosome Start End Links
hg38 chr17 2,322,396 2,336,457 Link
CDS sequence
ATGGCGGCCCACCGCCCCGGCCCGCTCAAGCAGCAGAATAAAGCTCATAAAGGCGGACGGCATCGGGGTCGGGGATCTGCACAGCGGGACGGCAAGGGCCGTCTGGCACTGAAAACCCTAAGCAAGAAGGTGAGAAAAGAACTCAGCAGAGTCGACCAGAGGCATCGCGCCAGCCAGCTCCGAAAGCAGAAGAAGGAGGCGGTTCTGGCAGAGAAGAGACAGCTGGGTGGCAAGGATGGCCCTCCTCATCAGGTACTGGTGGTGCCCCTGCACAGCAGAATTTCCCTGCCAGAGGCCATGCAGCTGCTTCAAGATAGGGACACTGGAACAGTACACTTGAATGAATTGGGAAACACCCAGAACTTTATGCTGCTGTGCCCCCGCTTGAAACATCGGTGGTTTTTCACCTCAGCAAGGCCAGGGGATCTGCACGTTGTGTTAGACATGGCTAAAGTAGCTGATACCATCCTGTTCCTCCTTGATCCACTAGAAGGCTGGGACAGCACCGGTGATTACTGTCTTTCCTGCCTCTTTGCTCAGGGCCTTCCGACCTATACACTAGCTGTCCAGGGGATTTCTGGCCTCCCACTGAAGAAACAAATAGATACCAGGAAGAAGCTAAGTAAAGCAGTGGAGAAGCGCTTTCCGCATGACAAACTCCTCTTGTTAGACACTCAACAGGAGGCAGGGATGCTGCTTAGGCAGTTGGCTAACCAGAAGCAACAGCATCTTGCTTTTCGAGATCGGCGGGCCTACCTATTTGCCCATGCTGTTGATTTTGTTCCTAGTGAAGAGAATAACTTGGTGGGCACCTTGAAAATTTCAGGCTATGTTCGAGGGCAGACTCTGAATGTCAATAGGTTGCTGCATATCGTTGGATATGGTGATTTCCAGATGAAACAGATAGATGCCCCCGGAGACCCTTTCCCTTTAAATCCTAGAGGAATTAAACCCCAAAAGGACCCAGACATGGCAATGGAGATTTGTGCTACGGATGCTGTAGATGATATGGAAGAAGGTCTTAAAGTCCTAATGAAGGCAGACCCTGGTAGACAGGAATCCTTGCAAGCAGAGGTTATCCCAGATCCAATGGAGGGAGAGCAAACCTGGCCCACTGAGGAGGAGCTGAGCGAGGCAAAGGATTTCTTGAAGGAAAGTTCTAAGGTGGTAAAGAAGGTCCCCAAAGGAACATCCAGTTACCAAGCTGAATGGATTTTGGATGGTGGCAGCCAAAGTGGTGGGGAAGGAGATGAATATGAATATGATGATATGGAACATGAGGATTTTATGGAGGAGGAATCTCAGGATGAGAGTAGTGAAGAAGAGGAAGAATATGAAACTATGACTATTGGGGAGTCTGTGCATGATGATCTGTATGATAAGAAAGTAGATGAAGAAGCTGAGGCAAAAATGTTGGAGAAATATAAACAAGAAAGACTGGAAGAGATGTTTCCAGATGAAGTGGACACGCCCCGTGATGTGGCTGCTCGAATTCGATTTCAGAAATACAGAGGCCTTAAGAGCTTCCGGACATCTCCATGGGATCCTAAGGAAAACCTTCCTCAAGATTATGCTCGAATATTTCAGTTTCAGAACTTTACTAACACTAGGAAAAGCATCTTTAAAGAGGTTGAAGAAAAAGAGGTTGAAGGAGCTGAGGTTGGCTGGTATGTCACACTTCATGTCTCTGAAGTCCCCGTCTCAGTGGTCGAGTGCTTCAGGCAAGGAACACCCTTGATTGCATTTTCTTTACTACCTCATGAACAGAAGATGTCAGTATTGAATATGGTGGTGAGGCGTGACCCTGGCAACACTGAACCTGTGAAAGCCAAGGAAGAGCTCATATTTCACTGTGGATTCAGGCGCTTCCGAGCCTCACCTTTATTCTCTCAGCACACTGCAGCGGACAAACATAAATTGCAGAGATTCCTGACTGCTGACATGGCCCTGGTGGCGACAGTCTATGCGCCAATCACTTTTCCTCCTGCATCTGTGCTGCTTTTCAAGCAAAAAAGCAATGGAATGCACAGCCTCATTGCTACAGGCCATCTTATGTCAGTAGATCCAGACAGAATGGTCATCAAGAGAGTTGTTCTGAGTGGTCATCCTTTCAAAATTTTTACTAAGATGGCAGTAGTACGTTACATGTTCTTCAACAGAGAGGATGTGCTGTGGTTTAAACCAGTGGAACTGAGAACGAAGTGGGGCCGGAGAGGACATATCAAGGAACCTTTAGGTACCCATGGCCACATGAAATGCAGCTTTGATGGGAAGCTAAAATCTCAAGACACAGTACTGATGAACCTGTATAAACGAGTCTTCCCCAAATGGACTTATGATCCATATGTACCAGAACCAGTACCCTGGCTGAAAAGTGAGATTTCTTCAACAGTGCCTCAAGGGGGCATGGAGTAA
Amino sequence
MAAHRPGPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQLRKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQLLQDRDTGTVHLNELGNTQNFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHDKLLLLDTQQEAGMLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLLHIVGYGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYDPYVPEPVPWLKSEISSTVPQGGME*