ENST00000301364.10 TSR1

Information
Transcript ID
ENST00000301364.10
Genome
hg38
Position
chr17:2,322,396-2,336,457
Strand
-
CDS length
2,415
Amino acid length
805
Gene symbol
TSR1
Gene type
protein-coding
Gene description
TSR1 ribosome maturation factor
Gene Entrez Gene ID
55720
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
15 2,322,396 2,324,374
14 2,324,504 2,324,578
13 2,324,689 2,324,829
12 2,325,304 2,325,420
11 2,329,343 2,329,475
10 2,330,515 2,330,625
9 2,330,947 2,331,109
8 2,332,169 2,332,359
7 2,332,961 2,333,124
6 2,333,557 2,333,716
5 2,334,472 2,334,896
4 2,335,260 2,335,394
3 2,335,511 2,335,730
2 2,336,037 2,336,140
1 2,336,331 2,336,457
CDS
Exon number Type Start Stop
15 CDS 2,324,196 2,324,374
14 CDS 2,324,504 2,324,578
13 CDS 2,324,689 2,324,829
12 CDS 2,325,304 2,325,420
11 CDS 2,329,343 2,329,475
10 CDS 2,330,515 2,330,625
9 CDS 2,330,947 2,331,109
8 CDS 2,332,169 2,332,359
7 CDS 2,332,961 2,333,124
6 CDS 2,333,557 2,333,716
5 CDS 2,334,472 2,334,896
4 CDS 2,335,260 2,335,394
3 CDS 2,335,511 2,335,730
2 CDS 2,336,037 2,336,140
1 CDS 2,336,331 2,336,427
Other genome
Genome Chromosome Start End Links
hg19 chr17 2,225,690 2,239,751 Link
CDS sequence
ATGGCGGCCCACCGCCCCGGCCCGCTCAAGCAGCAGAATAAAGCTCATAAAGGCGGACGGCATCGGGGTCGGGGATCTGCACAGCGGGACGGCAAGGGCCGTCTGGCACTGAAAACCCTAAGCAAGAAGGTGAGAAAAGAACTCAGCAGAGTCGACCAGAGGCATCGCGCCAGCCAGCTCCGAAAGCAGAAGAAGGAGGCGGTTCTGGCAGAGAAGAGACAGCTGGGTGGCAAGGATGGCCCTCCTCATCAGGTACTGGTGGTGCCCCTGCACAGCAGAATTTCCCTGCCAGAGGCCATGCAGCTGCTTCAAGATAGGGACACTGGAACAGTACACTTGAATGAATTGGGAAACACCCAGAACTTTATGCTGCTGTGCCCCCGCTTGAAACATCGGTGGTTTTTCACCTCAGCAAGGCCAGGGGATCTGCACGTTGTGTTAGACATGGCTAAAGTAGCTGATACCATCCTGTTCCTCCTTGATCCACTAGAAGGCTGGGACAGCACCGGTGATTACTGTCTTTCCTGCCTCTTTGCTCAGGGCCTTCCGACCTATACACTAGCTGTCCAGGGGATTTCTGGCCTCCCACTGAAGAAACAAATAGATACCAGGAAGAAGCTAAGTAAAGCAGTGGAGAAGCGCTTTCCGCATGACAAACTCCTCTTGTTAGACACTCAACAGGAGGCAGGGATGCTGCTTAGGCAGTTGGCTAACCAGAAGCAACAGCATCTTGCTTTTCGAGATCGGCGGGCCTACCTATTTGCCCATGCTGTTGATTTTGTTCCTAGTGAAGAGAATAACTTGGTGGGCACCTTGAAAATTTCAGGCTATGTTCGAGGGCAGACTCTGAATGTCAATAGGTTGCTGCATATCGTTGGATATGGTGATTTCCAGATGAAACAGATAGATGCCCCCGGAGACCCTTTCCCTTTAAATCCTAGAGGAATTAAACCCCAAAAGGACCCAGACATGGCAATGGAGATTTGTGCTACGGATGCTGTAGATGATATGGAAGAAGGTCTTAAAGTCCTAATGAAGGCAGACCCTGGTAGACAGGAATCCTTGCAAGCAGAGGTTATCCCAGATCCAATGGAGGGAGAGCAAACCTGGCCCACTGAGGAGGAGCTGAGCGAGGCAAAGGATTTCTTGAAGGAAAGTTCTAAGGTGGTAAAGAAGGTCCCCAAAGGAACATCCAGTTACCAAGCTGAATGGATTTTGGATGGTGGCAGCCAAAGTGGTGGGGAAGGAGATGAATATGAATATGATGATATGGAACATGAGGATTTTATGGAGGAGGAATCTCAGGATGAGAGTAGTGAAGAAGAGGAAGAATATGAAACTATGACTATTGGGGAGTCTGTGCATGATGATCTGTATGATAAGAAAGTAGATGAAGAAGCTGAGGCAAAAATGTTGGAGAAATATAAACAAGAAAGACTGGAAGAGATGTTTCCAGATGAAGTGGACACGCCCCGTGATGTGGCTGCTCGAATTCGATTTCAGAAATACAGAGGCCTTAAGAGCTTCCGGACATCTCCATGGGATCCTAAGGAAAACCTTCCTCAAGATTATGCTCGAATATTTCAGTTTCAGAACTTTACTAACACTAGGAAAAGCATCTTTAAAGAGGTTGAAGAAAAAGAGGTTGAAGGAGCTGAGGTTGGCTGGTATGTCACACTTCATGTCTCTGAAGTCCCCGTCTCAGTGGTCGAGTGCTTCAGGCAAGGAACACCCTTGATTGCATTTTCTTTACTACCTCATGAACAGAAGATGTCAGTATTGAATATGGTGGTGAGGCGTGACCCTGGCAACACTGAACCTGTGAAAGCCAAGGAAGAGCTCATATTTCACTGTGGATTCAGGCGCTTCCGAGCCTCACCTTTATTCTCTCAGCACACTGCAGCGGACAAACATAAATTGCAGAGATTCCTGACTGCTGACATGGCCCTGGTGGCGACAGTCTATGCGCCAATCACTTTTCCTCCTGCATCTGTGCTGCTTTTCAAGCAAAAAAGCAATGGAATGCACAGCCTCATTGCTACAGGCCATCTTATGTCAGTAGATCCAGACAGAATGGTCATCAAGAGAGTTGTTCTGAGTGGTCATCCTTTCAAAATTTTTACTAAGATGGCAGTAGTACGTTACATGTTCTTCAACAGAGAGGATGTGCTGTGGTTTAAACCAGTGGAACTGAGAACGAAGTGGGGCCGGAGAGGACATATCAAGGAACCTTTAGGTACCCATGGCCACATGAAATGCAGCTTTGATGGGAAGCTAAAATCTCAAGACACAGTACTGATGAACCTGTATAAACGAGTCTTCCCCAAATGGACTTATGATCCATATGTACCAGAACCAGTACCCTGGCTGAAAAGTGAGATTTCTTCAACAGTGCCTCAAGGGGGCATGGAGTAA
Amino sequence
MAAHRPGPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQLRKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQLLQDRDTGTVHLNELGNTQNFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGWDSTGDYCLSCLFAQGLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHDKLLLLDTQQEAGMLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLLHIVGYGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKKVPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTIGESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKSFRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAEVGWYVTLHVSEVPVSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYDPYVPEPVPWLKSEISSTVPQGGME*