ENST00000343550.9 USF2

Information
Transcript ID
ENST00000343550.9
Genome
hg19
Position
chr19:35,759,881-35,770,718
Strand
+
CDS length
840
Amino acid length
280
Gene symbol
USF2
Gene type
protein-coding
Gene description
upstream transcription factor 2, c-fos interacting
Gene Entrez Gene ID
7392
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 35,759,881 35,760,066
2 35,760,349 35,760,395
3 35,760,484 35,760,602
4 35,761,350 35,761,500
5 35,761,621 35,761,708
6 35,761,986 35,762,044
7 35,769,601 35,769,695
8 35,769,849 35,769,977
9 35,770,070 35,770,718
CDS
Exon number Type Start Stop
1 CDS 35,760,005 35,760,066
2 CDS 35,760,349 35,760,395
3 CDS 35,760,484 35,760,602
4 CDS 35,761,350 35,761,500
5 CDS 35,761,621 35,761,708
6 CDS 35,761,986 35,762,044
7 CDS 35,769,601 35,769,695
8 CDS 35,769,849 35,769,977
9 CDS 35,770,070 35,770,159
Other genome
Genome Chromosome Start End Links
hg38 chr19 35,268,978 35,279,815 Link
CDS sequence
ATGGACATGCTGGACCCGGGTCTGGATCCCGCTGCCTCGGCCACCGCTGCTGCCGCCGCCAGCCACGACAAGGGACCCGAGGCGGAGGAGGGCGTCGAGCTGCAGGAAGGCGGGGACGGCCCAGGAGCGGAGGAGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGAGATACTACGGCTGTGTCCGTACAGACCACAGACCAGAGCTTGCAGGCTGGAGGCCAGTTCTACGTCATGATGACGCCCCAGGATGTGCTTCAGACAGGAACACAGAGGACGATCGCCCCCCGGACACACCCTTACTCTCCAAAAATTGATGGAACCAGAACACCCCGAGATGAGAGGAGAAGAGCCCAGCACAACGAAGTGGAGCGGAGGCGGAGGGACAAGATCAACAACTGGATCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCGAGTAAAGGAGGGATCCTGTCCAAGGCCTGCGATTACATCCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCAGCAGATCGAGGAGCTGAAGAATGAGAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGA
Amino sequence
MDMLDPGLDPAASATAAAAASHDKGPEAEEGVELQEGGDGPGAEEQTAVAITSVQQAAFGDHNIQYQFRTETNGGQAVIQNPFSNGGSPAAEAVSGEARFAYFPASSVGDTTAVSVQTTDQSLQAGGQFYVMMTPQDVLQTGTQRTIAPRTHPYSPKIDGTRTPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMVGEGTRQ*