ENST00000343550.9 USF2

Information
Transcript ID
ENST00000343550.9
Genome
hg38
Position
chr19:35,268,978-35,279,815
Strand
+
CDS length
840
Amino acid length
280
Gene symbol
USF2
Gene type
protein-coding
Gene description
upstream transcription factor 2, c-fos interacting
Gene Entrez Gene ID
7392
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 35,268,978 35,269,163
2 35,269,446 35,269,492
3 35,269,581 35,269,699
4 35,270,447 35,270,597
5 35,270,718 35,270,805
6 35,271,083 35,271,141
7 35,278,698 35,278,792
8 35,278,946 35,279,074
9 35,279,167 35,279,815
CDS
Exon number Type Start Stop
1 CDS 35,269,102 35,269,163
2 CDS 35,269,446 35,269,492
3 CDS 35,269,581 35,269,699
4 CDS 35,270,447 35,270,597
5 CDS 35,270,718 35,270,805
6 CDS 35,271,083 35,271,141
7 CDS 35,278,698 35,278,792
8 CDS 35,278,946 35,279,074
9 CDS 35,279,167 35,279,256
Other genome
Genome Chromosome Start End Links
hg19 chr19 35,759,881 35,770,718 Link
CDS sequence
ATGGACATGCTGGACCCGGGTCTGGATCCCGCTGCCTCGGCCACCGCTGCTGCCGCCGCCAGCCACGACAAGGGACCCGAGGCGGAGGAGGGCGTCGAGCTGCAGGAAGGCGGGGACGGCCCAGGAGCGGAGGAGCAGACAGCGGTGGCCATCACCAGCGTCCAGCAGGCGGCGTTCGGCGACCACAACATCCAGTACCAGTTCCGCACAGAGACAAATGGAGGACAGGCTGTGATCCAAAATCCCTTCAGCAATGGTGGCAGTCCGGCGGCCGAGGCTGTCAGCGGGGAGGCACGATTTGCCTATTTCCCAGCGTCCAGTGTGGGAGATACTACGGCTGTGTCCGTACAGACCACAGACCAGAGCTTGCAGGCTGGAGGCCAGTTCTACGTCATGATGACGCCCCAGGATGTGCTTCAGACAGGAACACAGAGGACGATCGCCCCCCGGACACACCCTTACTCTCCAAAAATTGATGGAACCAGAACACCCCGAGATGAGAGGAGAAGAGCCCAGCACAACGAAGTGGAGCGGAGGCGGAGGGACAAGATCAACAACTGGATCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAGCAAGACGGGAGCGAGTAAAGGAGGGATCCTGTCCAAGGCCTGCGATTACATCCGGGAGTTGCGCCAGACCAACCAGCGCATGCAGGAGACCTTCAAAGAGGCCGAGCGGCTGCAGATGGACAACGAGCTCCTGAGGCAGCAGATCGAGGAGCTGAAGAATGAGAACGCCCTGCTTCGAGCCCAGCTGCAGCAGCACAACCTGGAGATGGTGGGCGAGGGCACCCGGCAGTGA
Amino sequence
MDMLDPGLDPAASATAAAAASHDKGPEAEEGVELQEGGDGPGAEEQTAVAITSVQQAAFGDHNIQYQFRTETNGGQAVIQNPFSNGGSPAAEAVSGEARFAYFPASSVGDTTAVSVQTTDQSLQAGGQFYVMMTPQDVLQTGTQRTIAPRTHPYSPKIDGTRTPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKEAERLQMDNELLRQQIEELKNENALLRAQLQQHNLEMVGEGTRQ*