ENST00000427562.6 LAMP5

Information
Transcript ID
ENST00000427562.6
Genome
hg19
Position
chr20:9,495,005-9,510,570
Strand
+
CDS length
711
Amino acid length
237
Gene symbol
LAMP5
Gene type
protein-coding
Gene description
lysosomal associated membrane protein family member 5
Gene Entrez Gene ID
24141
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 9,495,005 9,495,563
2 9,496,100 9,496,272
3 9,496,903 9,497,008
4 9,498,687 9,498,875
5 9,510,289 9,510,570
CDS
Exon number Type Start Stop
1 CDS 9,495,500 9,495,563
2 CDS 9,496,100 9,496,272
3 CDS 9,496,903 9,497,008
4 CDS 9,498,687 9,498,875
5 CDS 9,510,289 9,510,467
Other genome
Genome Chromosome Start End Links
hg38 chr20 9,514,358 9,529,923 Link
CDS sequence
ATGGATCTCCAAGGAAGAGGGGTCCCCAGCATCGACAGACTTCGAGTTCTCCTGATGTTGTTCCATACAATGGCTCAAATCATGGCAGAACAAGAAGTGGAAAATCTCTCAGGCCTTTCCACTAACCCTGAAAAAGATATATTTGTGGTGCGGGAAAATGGGACGACGTGTCTCATGGCAGAGTTTGCAGCCAAATTTATTGTACCTTATGATGTGTGGGCCAGCAACTACGTAGATGAAAGCCACAACATGTCCAAGGGACCTGAGGCGACTTGGAGGCTGAGCAAAGTGCAGTTTGTCTACGACTCCTCGGAGAAAACCCACTTCAAAGACGCAGTCAGTGCTGGGAAGCACACAGCCAACTCGCACCACCTCTCTGCCTTGGTCACCCCCGCTGGGAAGTCCTATGAGTGTCAAGCTCAACAAACCATTTCACTGGCCTCTAGTGATCCGCAGAAGACGGTCACCATGATCCTGTCTGCGGTCCACATCCAACCTTTTGACATTATCTCAGATTTTGTCTTCAGTGAAGAGCATAAATGCCCAGTGGATGAGCGGGAGCAACTGGAAGAAACCTTGCCCCTGATTTTGGGGCTCATCTTGGGCCTCGTCATCATGGTAACACTCGCGATTTACCACGTCCACCACAAAATGACTGCCAACCAGGTGCAGATCCCTCGGGACAGATCCCAGTATAAGCACATGGGCTAG
Amino sequence
MDLQGRGVPSIDRLRVLLMLFHTMAQIMAEQEVENLSGLSTNPEKDIFVVRENGTTCLMAEFAAKFIVPYDVWASNYVDESHNMSKGPEATWRLSKVQFVYDSSEKTHFKDAVSAGKHTANSHHLSALVTPAGKSYECQAQQTISLASSDPQKTVTMILSAVHIQPFDIISDFVFSEEHKCPVDEREQLEETLPLILGLILGLVIMVTLAIYHVHHKMTANQVQIPRDRSQYKHMG*