ENST00000436744.2 NICN1

Information
Transcript ID
ENST00000436744.2
Genome
hg38
Position
chr3:49,424,177-49,429,326
Strand
-
CDS length
528
Amino acid length
176
Gene symbol
NICN1
Gene type
protein-coding
Gene description
nicolin 1, tubulin polyglutamylase complex subunit
Gene Entrez Gene ID
84276
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 49,424,177 49,424,874
4 49,424,949 49,425,053
3 49,425,367 49,425,438
2 49,426,252 49,426,428
1 49,429,108 49,429,326
CDS
Exon number Type Start Stop
5 CDS 49,424,833 49,424,874
4 CDS 49,424,949 49,425,053
3 CDS 49,425,367 49,425,438
2 CDS 49,426,252 49,426,428
1 CDS 49,429,108 49,429,239
Other genome
Genome Chromosome Start End Links
hg19 chr3 49,461,610 49,466,759 Link
CDS sequence
ATGTCCCGCGTTTTGGTGCCTTGCCATGTGAAAGGCTCCGTAGCCCTCCAGGTGGGCGACGTGCGGACCTCCCAAGGCCGGCCTGGCGTGCTGGTCATCGATGTCACCTTCCCCAGCGTCGCTCCCTTCGAGTTGCAGGAAATCACGTTTAAGAATTACTACACAGCTTTTTTGAGCATCCGTGTCCGTCAGTACACCTCAGCACACACACCTGCCAAGTGGGTGACCTGCCTGCGGGACTACTGCCTAATGCCTGACCCACACAGTGAGGAGGGAGCCCAGGAGTATGTATCGCTGTTCAAGCATCAGAGCCCCTCCGTGACCTTTCCCAAGTGGCTCTCCCACCCAGTGCCCTGTGAGCAACCTGCACTCCTCCGTGAGGGTCTCCCAGACCCCAGCAGGGTATCCTCCGAGGTGCAGCAGATGTGGGCACTGACAGAGATGATCCGGGCCAGTCACACCTCCGCAAGGATCGGCCGCTTTGATGTGGATGGCTGTTATGACCTGAACTTGCTCTCCTACACTTGA
Amino sequence
MSRVLVPCHVKGSVALQVGDVRTSQGRPGVLVIDVTFPSVAPFELQEITFKNYYTAFLSIRVRQYTSAHTPAKWVTCLRDYCLMPDPHSEEGAQEYVSLFKHQSPSVTFPKWLSHPVPCEQPALLREGLPDPSRVSSEVQQMWALTEMIRASHTSARIGRFDVDGCYDLNLLSYT*