ENST00000576112.2 TSR1

Information
Transcript ID
ENST00000576112.2
Genome
hg38
Position
chr17:2,333,390-2,336,457
Strand
-
CDS length
1,107
Amino acid length
369
Gene symbol
TSR1
Gene type
protein-coding
Gene description
TSR1 ribosome maturation factor
Gene Entrez Gene ID
55720
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 2,333,390 2,333,716
5 2,334,472 2,334,896
4 2,335,308 2,335,394
3 2,335,511 2,335,730
2 2,336,037 2,336,140
1 2,336,331 2,336,457
CDS
Exon number Type Start Stop
6 CDS 2,333,543 2,333,716
5 CDS 2,334,472 2,334,896
4 CDS 2,335,308 2,335,394
3 CDS 2,335,511 2,335,730
2 CDS 2,336,037 2,336,140
1 CDS 2,336,331 2,336,427
Other genome
Genome Chromosome Start End Links
hg19 chr17 2,236,684 2,239,751 Link
CDS sequence
ATGGCGGCCCACCGCCCCGGCCCGCTCAAGCAGCAGAATAAAGCTCATAAAGGCGGACGGCATCGGGGTCGGGGATCTGCACAGCGGGACGGCAAGGGCCGTCTGGCACTGAAAACCCTAAGCAAGAAGGTGAGAAAAGAACTCAGCAGAGTCGACCAGAGGCATCGCGCCAGCCAGCTCCGAAAGCAGAAGAAGGAGGCGGTTCTGGCAGAGAAGAGACAGCTGGGTGGCAAGGATGGCCCTCCTCATCAGGTACTGGTGGTGCCCCTGCACAGCAGAATTTCCCTGCCAGAGGCCATGCAGCTGCTTCAAGATAGGGACACTGGAACAGTACACTTGAATGAATTGGGAAACACCCAGAACTTTATGCTGCTGTGCCCCCGCTTGAAACATCGGTGGTTTTTCACCTCAGCAAGGCCAGGGGATCTGCACGTTGTGTTAGACATGGCTAAAGTAGCTGATACCATCCTGTTCCTCCTTGATCCACTAGAAGGCTGGGACAGCACCGCACTAGCTGTCCAGGGGATTTCTGGCCTCCCACTGAAGAAACAAATAGATACCAGGAAGAAGCTAAGTAAAGCAGTGGAGAAGCGCTTTCCGCATGACAAACTCCTCTTGTTAGACACTCAACAGGAGGCAGGGATGCTGCTTAGGCAGTTGGCTAACCAGAAGCAACAGCATCTTGCTTTTCGAGATCGGCGGGCCTACCTATTTGCCCATGCTGTTGATTTTGTTCCTAGTGAAGAGAATAACTTGGTGGGCACCTTGAAAATTTCAGGCTATGTTCGAGGGCAGACTCTGAATGTCAATAGGTTGCTGCATATCGTTGGATATGGTGATTTCCAGATGAAACAGATAGATGCCCCCGGAGACCCTTTCCCTTTAAATCCTAGAGGAATTAAACCCCAAAAGGACCCAGACATGGCAATGGAGATTTGTGCTACGGATGCTGTAGATGATATGGAAGAAGGTCTTAAAGTCCTAATGAAGGCAGACCCTGGTAGACAGGAATCCTTGCAAGCAGAGGTTATCCCAGATCCAATGGAGGGAGAGCAAACCTGGCCCACTGAGGAGGAGCTGAGCGAGGCAAAGGGTCAGTATTGGTAA
Amino sequence
MAAHRPGPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKVRKELSRVDQRHRASQLRKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQLLQDRDTGTVHLNELGNTQNFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLLDPLEGWDSTALAVQGISGLPLKKQIDTRKKLSKAVEKRFPHDKLLLLDTQQEAGMLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISGYVRGQTLNVNRLLHIVGYGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKGQYW*