ENST00000617777.1 LINC00548
Information
- Transcript ID
- ENST00000617777.1
- Genome
- hg38
- Position
- chr13:40,194,509-40,220,502
- Strand
- -
- CDS length
- 0
- Amino acid length
- 0
- Gene symbol
- LINC00548
- Gene type
- ncRNA
- Gene description
- long intergenic non-protein coding RNA 548
- Gene Entrez Gene ID
- 400123
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 40,194,509 | 40,196,391 |
| 5 | 40,197,268 | 40,197,411 |
| 4 | 40,197,765 | 40,197,877 |
| 3 | 40,204,328 | 40,204,518 |
| 2 | 40,206,899 | 40,207,052 |
| 1 | 40,220,437 | 40,220,502 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr13 | 40,768,646 | 40,794,639 | Link |
CDS sequence
Amino sequence