ENST00000402905.7 CARF

Information
Transcript ID
ENST00000402905.7
Genome
hg38
Position
chr2:202,912,214-202,987,063
Strand
+
CDS length
2,178
Amino acid length
726
Gene symbol
CARF
Gene type
protein-coding
Gene description
calcium responsive transcription factor
Gene Entrez Gene ID
79800
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 202,912,214 202,912,324
2 202,917,877 202,918,043
3 202,941,860 202,941,980
4 202,942,740 202,942,967
5 202,952,559 202,952,679
6 202,954,005 202,954,134
7 202,955,674 202,955,758
8 202,961,237 202,961,426
9 202,966,978 202,967,098
10 202,969,919 202,970,062
11 202,971,505 202,971,738
12 202,974,334 202,974,496
13 202,977,269 202,977,332
14 202,981,555 202,981,685
15 202,982,072 202,982,441
16 202,983,506 202,987,063
CDS
Exon number Type Start Stop
3 CDS 202,941,903 202,941,980
4 CDS 202,942,740 202,942,967
5 CDS 202,952,559 202,952,679
6 CDS 202,954,005 202,954,134
7 CDS 202,955,674 202,955,758
8 CDS 202,961,237 202,961,426
9 CDS 202,966,978 202,967,098
10 CDS 202,969,919 202,970,062
11 CDS 202,971,505 202,971,738
12 CDS 202,974,334 202,974,496
13 CDS 202,977,269 202,977,332
14 CDS 202,981,555 202,981,685
15 CDS 202,982,072 202,982,441
16 CDS 202,983,506 202,983,624
Other genome
Genome Chromosome Start End Links
hg19 chr2 203,776,937 203,851,786 Link
CDS sequence
ATGGAACAATCTAATGATTCATTAAGAGTCAACCATAATGACGGTGAAGAGTCAAAAACCAGTGCTCAAGTATTTGAGCATCTAATCTGTATGGACTCCAGGGATTCTTCCTTTGGACAAAATGATTCTCCTACAGTTTTGCCCATCACTACTCGTGAAGCAAATAATTCACTCATATCACAGAATATACCAGGGCCCCTGACTCAGACACAGACTCTTTCTGCAGAGCAATTCCATCTAGTGGACCAAAATGGGCAGGCTATTCAATATGAACTTCAGTCATTGGGGGAATCCAATGCACAAATGATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCTCAGGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAGCAGACAATACCAGCAATTACATTCTTCATCCTCAAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTGGAAGAACCCCTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACACCTATATGGGCCTGCCGTCTTAGGAGCTGTGAGAAAATTGGAGATTCATACCGTGGCTACTGTGTAAGTGAGACTGAATTAGAAAGTGTCCTAACATTTCACAAGCAGCAAACACAGAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACACGCTTGATGTGGAAATCCCAGTATGTTCCATATGATGGAATCCCATTTGTTAATGCAGGGAGTAGAGCTGTGGTAATGGAGTGTCAGTATGGGCCAAGAAGAAAAGGTTTCCAGTTAAAAAAAGTCAGTGAGCAGGAAAGCAGGTCTTGTCAGCTCTACAAAGCCACTTGTCCAGCTCGGATTTACATTAAAAAGGTACAGAAGTTTCCTGAATATAGAGTTCCTACAGACCCCAAAATTGACAAGAAAATTATCAGAATGGAGCAGGAGAAAGCTTTTAACATGCTAAAGAAGAACTTGGTAGATGCTGGTGGTGTTCTTAGGTGGTATGTACAGTTACCTACACAGCAAGCTCATCAGTATCATGAATTAGAGACTCCCTGCCTCACTTTGTCACCTTCTCCTTTTCCTGTGTCTTCTCTTGAAGAAGAGGAAACTGCAGTTAGAGATGAGAATTGTGCATTACCCTCACGTTTACATCCTCAAGTAGCACATAAGATTCAAGAATTAGTATCACAGGGAATAGAACAAGTGTATGCAGTAAGGAAACAGCTAAGAAAATTTGTGGAAAGGGAACTGTTCAAACCCGATGAGGTACCTGAAAGACATAATTTATCTTTTTTTCCAACTGTAAATGATATAAAAAATCACATCCATGAGGTACAGAAATCCTTGAGAAATGGAGATACGGTATATAACTCAGAGATTATTCCAGCAACGCTTCAATGGACTACAGACAGTGGGAATATTCTCAAAGAGACCATGACAGTTACATTTGCAGAAGGAAATTCACCAGGAGAATCAATTACCACCAAAGTGGAAACAAATCAGACCAGGGGTTCTTTGTCTCCTGAGCCAACCCACTTGCTCTCCTCACTCTCCTCATTTCAGCCCAAAATATTTACACAACTACAGGGTTTGCAGTTACAACCAAGGTACACCTCTCCTGATGAATCACCAGCTGTGGTATCAGTAAATAACCAGCCGTCCTCTAGTCCTTCAGGACTTCTGGATACAATAGGAAGTGCTGTAATGAATAATAATTCTCTACTGCTTGGTCAAAGTCATAGCCTTCAAAGAGATACATGCTTAACCCAAAACAATAGTACTGCCTCCACCATGGGTAACCTTCCAGAACCAGATCAAAATCTAGTTGCAATGGACGAGCTGGTAGAAGTTGGAGATGTTGAGGATACAGGGAATCTGGAAGGAACTGTTCATCGGATTCTGTTGGGAGATGTGCAGACTATTCCAATACAGATTATAGACAACCACTCAGCTCTTATTGAAGAAAATCCAGAAAGTACCATTTCTGTGAGCCAAGTTAAACAAGAACCCAAAGAACCAGCATTGTCTATGGAAGCAAAAAAAACTGTGGACTATAAGAAATTATCTGCTACATAA
Amino sequence
MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLPKKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQTQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKVSEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVDAGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNLEGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYKKLSAT*