CARF calcium responsive transcription factor
Information
- Symbol
- CARF
- Type
- protein-coding
- Description
- calcium responsive transcription factor
- Entrez Gene ID
- 79800
- Genome
- hg19
- Position
- chr2:203,776,998-203,852,986
- Genome
- hg38
- Position
- chr2:202,912,275-202,988,263
- MIM
- 607586 OMIM
- HGNC
- HGNC:14435 HGNC
- Ensembl
- ENSG00000138380 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 12 |
| Likely benign | 0 | 8 |
| Uncertain significance | 0 | 66 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
86 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | ALS2CR8 |
| SYNONYM | NYD-SP24 |
| MIM | 607586 OMIM |
| HGNC | HGNC:14435 HGNC |
| Ensembl | ENSG00000138380 Ensembl |
| AllianceGenome | HGNC:14435 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000438828.4 | hg38 | chr2 | 202,912,275 | 202,988,263 | 75,989 |
| ENST00000444724.5 | hg38 | chr2 | 202,912,255 | 202,963,168 | 50,914 |
| ENST00000320443.12 | hg38 | chr2 | 202,912,218 | 202,986,485 | 74,268 |
| ENST00000414439.5 | hg38 | chr2 | 202,912,283 | 202,983,642 | 71,360 |
| ENST00000402905.7 | hg38 | chr2 | 202,912,214 | 202,987,063 | 74,850 |
| ENST00000434998.5 | hg38 | chr2 | 202,912,289 | 202,962,533 | 50,245 |
| ENST00000428585.5 | hg38 | chr2 | 202,912,283 | 202,983,935 | 71,653 |
| ENST00000320443.12 | hg19 | chr2 | 203,776,941 | 203,851,208 | 74,268 |
| ENST00000402905.7 | hg19 | chr2 | 203,776,937 | 203,851,786 | 74,850 |
| ENST00000414439.5 | hg19 | chr2 | 203,777,006 | 203,848,365 | 71,360 |
| ENST00000428585.5 | hg19 | chr2 | 203,777,006 | 203,848,658 | 71,653 |
| ENST00000434998.5 | hg19 | chr2 | 203,777,012 | 203,827,256 | 50,245 |
| ENST00000438828.4 | hg19 | chr2 | 203,776,998 | 203,852,986 | 75,989 |
| ENST00000444724.5 | hg19 | chr2 | 203,776,978 | 203,827,891 | 50,914 |
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