ENST00000434998.5 CARF
Information
- Transcript ID
- ENST00000434998.5
- Genome
- hg38
- Position
- chr2:202,912,289-202,962,533
- Strand
- +
- CDS length
- 624
- Amino acid length
- 208
- Gene symbol
- CARF
- Gene type
- protein-coding
- Gene description
- calcium responsive transcription factor
- Gene Entrez Gene ID
- 79800
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 202,912,289 | 202,912,324 |
| 2 | 202,917,877 | 202,918,043 |
| 3 | 202,924,297 | 202,924,415 |
| 4 | 202,952,559 | 202,952,679 |
| 5 | 202,954,005 | 202,954,134 |
| 6 | 202,955,674 | 202,955,758 |
| 7 | 202,961,237 | 202,962,533 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 202,952,559 | 202,952,679 |
| 5 | CDS | 202,954,005 | 202,954,134 |
| 6 | CDS | 202,955,674 | 202,955,758 |
| 7 | CDS | 202,961,237 | 202,961,524 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 203,777,012 | 203,827,256 | Link |
CDS sequence
ATGATCGTTGCCAGCCCAACAGAAAATGGACAGGTACTTCGTGTAATTCCACCTACCCAGACAGGAATGGCACAAGTGATTATACCTCAGGGGCAACTTGTGGATGTGAATAGTCCTCGGGATGTCCCTGAAGAGAAACCCAGTAACAGAAACTTACCAACTGTAAGAGTGGATACTCTAGCAGACAATACCAGCAATTACATTCTTCATCCTCAAACATCCTTCCCATTGCCCAAAAAGTCAGTGACCGGAATGCTGGAAGAACCCCTTCTGGGGCCTCTTCAGCCACTTTCTTCTAATACACCTATATGGGCCTGCCGTCTTAGGAGCTGTGAGAAAATTGGAGATTCATACCGTGGCTACTGTGTAAGTGAGACTGAATTAGAAAGTGTCCTAACATTTCACAAGCAGCAAACACAGAGTGTTTGGGGGACCCGTCAGTCTCCAAGCCCAGCCAAGCCTGCTACACGCTTGATGTGGAAATCCCAGTATGTTCCATATGATGGAATCCCATTTGTTAATGCAGGTACTTTTTTAAAGAATTATTTTAAAAGGTTCAGCAGCAGCCATAGTCCATTGTCAAAATGTGATTTTCCTAAGGTGATAACATTTTTATTTTGGTAG
Amino sequence
MIVASPTENGQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLPKKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQTQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGTFLKNYFKRFSSSHSPLSKCDFPKVITFLFW*