ENST00000507846.5 PCDH18

Information
Transcript ID
ENST00000507846.5
Genome
hg38
Position
chr4:137,519,703-137,532,494
Strand
-
CDS length
2,745
Amino acid length
915
Gene symbol
PCDH18
Gene type
protein-coding
Gene description
protocadherin 18
Gene Entrez Gene ID
54510
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 137,519,703 137,521,696
4 137,528,478 137,528,641
3 137,528,732 137,528,817
2 137,529,602 137,531,742
1 137,532,255 137,532,494
CDS
Exon number Type Start Stop
5 CDS 137,521,029 137,521,696
4 CDS 137,528,478 137,528,641
3 CDS 137,528,732 137,528,817
2 CDS 137,529,602 137,531,428
Other genome
Genome Chromosome Start End Links
hg19 chr4 138,440,857 138,453,648 Link
CDS sequence
ATGGGAGTACCTCAGAGGTCTGGCTCATCCATACTAAAAATAAGCATTTCAGACTCCAATGACAACAGCCCTGCTTTTGAGCAGCAATCTTATATAATACAACTCTTAGAAAACTCCCCGGTTGGCACTTTGCTCTTAGATCTGAATGCCACGGATCCAGATGAGGGCGCTAATGGGAAAATTGTATATTCCTTCAGCAGTCATGTGTCTCCCAAAATTATGGAGACTTTTAAAATTGATTCTGAAAGAGGACATTTGACTCTTTTCAAGCAAGTGGATTATGAAATCACCAAATCCTATGAGATTGATGTTCAGGCTCAAGATTTGGGTCCAAATTCAATCCCAGCCCATTGCAAAATTATAATTAAGGTTGTGGATGTTAATGACAATAAACCTGAAATTAACATCAACCTCATGTCCCCTGGAAAAGAAGAAATATCTTATATTTTTGAAGGGGATCCTATTGATACATTTGTTGCTTTGGTCAGAGTTCAGGACAAGGATTCTGGGCTGAATGGAGAAATAGTTTGTAAGCTTCATGGACATGGTCACTTTAAACTTCAGAAGACATATGAAAACAATTATTTAATCTTAACTAATGCCACACTGGATAGAGAAAAGAGATCTGAGTATAGTTTGACTGTAATCGCTGAGGACAGGGGGACACCCAGTCTCTCTACAGTGAAACATTTTACAGTTCAAATCAATGATATCAATGACAATCCACCCCACTTCCAGAGAAGCCGATATGAATTTGTAATTTCAGAAAATAACTCACCAGGGGCATATATCACCACTGTTACAGCCACAGATCCTGATCTTGGAGAAAATGGGCAAGTGACATACACCATCTTGGAGAGTTTTATTCTAGGAAGTTCCATAACTACATATGTAACCATTGACCCATCTAATGGAGCCATCTATGCCCTCAGAATCTTTGATCATGAAGAAGTGAGTCAGATCACTTTTGTGGTAGAAGCAAGAGATGGAGGAAGCCCGAAGCAACTGGTAAGCAATACCACAGTTGTGCTCACCATCATTGACGAAAATGACAACGTTCCTGTGGTTATAGGGCCTGCATTGCGTAATAATACGGCAGAAATCACCATTCCCAAAGGGGCTGAAAGTGGCTTTCATGTCACAAGAATAAGGGCAATTGACAGAGACTCTGGTGTGAATGCTGAACTCAGCTGCGCCATAGTAGCAGGTAATGAGGAGAATATCTTCATAATTGATCCACGATCATGTGACATCCATACCAACGTTAGCATGGATTCTGTTCCCTACACAGAATGGGAGCTGTCAGTTATCATTCAGGACAAAGGCAATCCTCAGCTACATACCAAAGTCCTTCTGAAGTGCATGATCTTTGAATATGCAGAGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCCTTGGATGTCTCCATGATAATAATTATTTCCTTAGGAGCAATTTGTGCAGTGTTGCTGGTTATTATGGTGCTATTTGCAACTAGGTGTAACCGCGAGAAGAAAGACACTAGATCCTATAACTGCAGGGTGGCCGAATCAACTTACCAGCACCACCCAAAAAGGCCATCCCGGCAGATTCACAAAGGGGACATCACATTGGTGCCTACCATAAATGGCACTCTGCCCATCAGATCTCATCACAGATCGTCTCCATCTTCATCTCCTACCTTAGAAAGAGGGCAGATGGGCAGCCGGCAGAGTCACAACAGTCACCAGTCACTCAACAGTTTGGTGACAATCTCATCAAACCACGTGCCAGAGAATTTCTCATTAGAACTCACCCACGCCACTCCTGCTGTTGAGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGAGGAAACAAATATTCCAGGAGCTACAGATATGCCCTTCAAGACATGGACAAATTTAGCTTGAAAGACAGTGGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTATGATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGGGTGAAGGATTCAGCGACCTGTTTCTCACAGATGGAAGAATTCCAGCAGCTATGAGACTCTGCACGGAGGAGTGCAGGGTCCTGGGACACTCTGACCAGTGCTGGATGCCACCACTGCCCTCACCGTCTTCTGATTATAGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCATCCACATCAGAGTCTTGAGGATGACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCCTTCCCTGGACACCTATTCTGAATGCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACTCACTCCAGTGTGCAGCCTTCTTCAAAATGGCTGCCAGCCATGGAGGAGATCCCTGAAAATTATGAGGAAGATGATTTTGACAATGTGCTCAACCACCTCAATGATGGGAAACACGAACTCATGGATGCCAGTGAACTGGTGGCAGAGATTAACAAACTGCTTCAAGATGTCCGCCAGAGCTAG
Amino sequence
MGVPQRSGSSILKISISDSNDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKIDSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMSPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTNATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNSPGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFHVTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQDKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPSSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQQQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPSLDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSVQPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS*