ENST00000564277.5 LAT

Information
Transcript ID
ENST00000564277.5
Genome
hg38
Position
chr16:28,985,054-28,990,019
Strand
+
CDS length
699
Amino acid length
233
Gene symbol
LAT
Gene type
protein-coding
Gene description
linker for activation of T cells
Gene Entrez Gene ID
27040
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 28,985,054 28,985,226
2 28,985,376 28,985,517
3 28,985,713 28,985,740
4 28,985,854 28,985,888
5 28,986,135 28,986,216
6 28,986,385 28,986,446
7 28,986,540 28,986,569
8 28,986,657 28,986,714
9 28,986,799 28,986,893
10 28,989,527 28,989,589
11 28,989,774 28,989,839
12 28,989,933 28,990,019
CDS
Exon number Type Start Stop
2 CDS 28,985,418 28,985,517
3 CDS 28,985,713 28,985,740
4 CDS 28,985,854 28,985,888
5 CDS 28,986,135 28,986,216
6 CDS 28,986,385 28,986,446
7 CDS 28,986,540 28,986,569
8 CDS 28,986,657 28,986,714
9 CDS 28,986,799 28,986,893
10 CDS 28,989,527 28,989,589
11 CDS 28,989,774 28,989,839
12 CDS 28,989,933 28,990,012
Other genome
Genome Chromosome Start End Links
hg19 chr16 28,996,375 29,001,340 Link
CDS sequence
ATGGAGGAGGCCATCCTGGTCCCCTGCGTGCTGGGGCTCCTGCTGCTGCCCATCCTGGCCATGTTGATGGCACTGTGTGTGCACTGCCACAGACTGCCAGGCTCCTACGACAGCACATCCTCAGATAGTTTGTATCCAAGGGGCATCCAGTTCAAACGGCCTCACACGGTTGCCCCCTGGCCACCTGCCTACCCACCTGTCACCTCCTACCCACCCCTGAGCCAGCCAGACCTGCTCCCCATCCCATCCCCGCAGCCCCTTGGGGGCTCCCACCGGACGCCATCTTCCCGGCGGGATTCTGATGGTGCCAACAGTGTGGCGAGCTACGAGAACGAGGAACCAGCCTGTGAGGATGCGGATGAGGATGAGGACGACTATCACAACCCAGGCTACCTGGTGGTGCTTCCTGACAGCACCCCGGCCACTAGCACTGCTGCCCCATCAGCTCCTGCACTCAGCACCCCTGGCATCCGAGACAGTGCCTTCTCCATGGAGTCCATTGATGATTACGTGAACGTTCCGGAGAGCGGGGAGAGCGCAGAAGCGTCTCTGGATGGCAGCCGGGAGTATGTGAATGTGTCCCAGGAACTGCATCCTGGAGCGGCTAAGACTGAGCCTGCCGCCCTGAGTTCCCAGGAGGCAGAGGAAGTGGAGGAAGAGGGGGCTCCAGATTACGAGAATCTGCAGGAGCTGAACTGA
Amino sequence
MEEAILVPCVLGLLLLPILAMLMALCVHCHRLPGSYDSTSSDSLYPRGIQFKRPHTVAPWPPAYPPVTSYPPLSQPDLLPIPSPQPLGGSHRTPSSRRDSDGANSVASYENEEPACEDADEDEDDYHNPGYLVVLPDSTPATSTAAPSAPALSTPGIRDSAFSMESIDDYVNVPESGESAEASLDGSREYVNVSQELHPGAAKTEPAALSSQEAEEVEEEGAPDYENLQELN*