ENST00000267219.12 SLAIN1
Information
- Transcript ID
- ENST00000267219.12
- Genome
- hg38
- Position
- chr13:77,719,598-77,764,229
- Strand
- +
- CDS length
- 1,050
- Amino acid length
- 350
- Gene symbol
- SLAIN1
- Gene type
- protein-coding
- Gene description
- SLAIN motif family member 1
- Gene Entrez Gene ID
- 122060
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 77,719,598 | 77,719,671 |
| 2 | 77,744,283 | 77,744,432 |
| 3 | 77,746,514 | 77,746,855 |
| 4 | 77,753,203 | 77,753,358 |
| 5 | 77,760,828 | 77,761,110 |
| 6 | 77,763,145 | 77,764,229 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 77,719,629 | 77,719,671 |
| 2 | CDS | 77,744,283 | 77,744,432 |
| 3 | CDS | 77,746,514 | 77,746,855 |
| 4 | CDS | 77,753,203 | 77,753,358 |
| 5 | CDS | 77,760,828 | 77,761,110 |
| 6 | CDS | 77,763,145 | 77,763,220 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr13 | 78,293,733 | 78,338,364 | Link |
CDS sequence
ATGGAAGCAGCGAGACGTTCCCTGTGCTTTAGACTGGAGCAAGGTTACACTTCCAGGGGCTCCCCACTCAGTCCCCAGTCATCTATCGACAGTGAGCTGAGTACTTCAGAATTGGAGGATGATTCTATCTCCATGGGATATAAATTACAGGACCTCACTGATGTTCAGATCATGGCTCGTCTGCAAGAAGAAAGTCTCAGGCAAGATTATGCTTCTACTTCAGCATCTGTATCAAGACATAGTTCCAGTGTGTCATTGAGTTCAGGAAAAAAAGGGACATGTAGTGATCAAGAATATGACCAATACAGTCTGGAGGATGAAGAGGAATTTGATCATTTGCCACCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTAGGAGGAGCCCCAGTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGCAACAGTATTATTCACCTCAAGCCCAAACTCCAGATCAGCAACCAAATAGGACCAATGGAGATAAGCTCCGAAGAAGTATGCCTAACCTAGCCCGGATGCCAAGTACAACTGCCATTAGTAGCAACATTAGTTCTCCGGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGGAATTTCAAGAATACAATCTTGTATTCCATCACCGGGACAGCTTCAACACAGGGTCCACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAGCCTCTTAAAGCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTATCAAACGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCTCTGTCTTCACTCAGCACTCTGAGGGATGGAAATTGGAGAGATGGTTGCTACTAA
Amino sequence
MEAARRSLCFRLEQGYTSRGSPLSPQSSIDSELSTSELEDDSISMGYKLQDLTDVQIMARLQEESLRQDYASTSASVSRHSSSVSLSSGKKGTCSDQEYDQYSLEDEEEFDHLPPPQPRLPRCSPFQRGIPHSQTFSSIRECRRSPSSQYFPSNNYQQQQYYSPQAQTPDQQPNRTNGDKLRRSMPNLARMPSTTAISSNISSPVTVRNSQSFDSSLHGAGNGISRIQSCIPSPGQLQHRVHSVGHFPVSIRQPLKATAYVSPTVQGSSNMPLSNGLQLYSNTGIPTPNKAAASGIMGRSALPRPSLAINGSNLPRSKIAQPVRSFLQPPKPLSSLSTLRDGNWRDGCY*