ENST00000556376.6 HOPX

Information
Transcript ID
ENST00000556376.6
Genome
hg38
Position
chr4:56,647,998-56,681,294
Strand
-
CDS length
222
Amino acid length
74
Gene symbol
HOPX
Gene type
protein-coding
Gene description
HOP homeobox
Gene Entrez Gene ID
84525
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 56,647,998 56,648,797
3 56,655,857 56,656,012
2 56,676,499 56,676,566
1 56,681,255 56,681,294
CDS
Exon number Type Start Stop
4 CDS 56,648,720 56,648,797
3 CDS 56,655,857 56,656,000
Other genome
Genome Chromosome Start End Links
hg19 chr4 57,514,164 57,547,460 Link
CDS sequence
ATGTCGGCGGAGACCGCGAGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATCGCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAA
Amino sequence
MSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEETQKWFKQRLAKWRRSEGLPSECRSVTD*