chr17:41267798:T>G Detail (hg19) (BRCA1)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr17:41,267,798-41,267,798
hg38	chr17:43,115,781-43,115,781 View the variant detail on this assembly version.

HGVS

BRCA1

Type	Transcript	Protein
RefSeq	NM_007298.3:c.81-2A>C
	NM_007300.3:c.81-2A>C
	NM_007294.3:c.81-2A>C
	NM_007297.3:c.-8+8236A>C
	NM_007299.3:c.81-2A>C
Ensemble	ENST00000489037.2:c.81-2A>C
	ENST00000700182.1:c.81-2A>C
	ENST00000476777.6:c.81-2A>C
	ENST00000713676.1:c.81-2A>C
	ENST00000644379.2:c.81-2A>C
	ENST00000586385.5:c.4+9401A>C
	ENST00000618469.2:c.81-2A>C
	ENST00000470026.6:c.81-2A>C
	ENST00000491747.6:c.81-2A>C
	ENST00000634433.2:c.81-2A>C
	ENST00000591849.5:c.-99+9490A>C
	ENST00000352993.7:c.81-2A>C
	ENST00000493919.6:c.-8+8236A>C
	ENST00000591534.5:c.-44+9490A>C
	ENST00000471181.7:c.81-2A>C
	ENST00000497488.2:c.-219+9490A>C
	ENST00000357654.9:c.81-2A>C
	ENST00000461574.2:c.81-2A>C
	ENST00000484087.6:c.81-2A>C
	ENST00000494123.6:c.81-2A>C
	ENST00000478531.6:c.81-2A>C
	ENST00000493795.5:c.-8+8236A>C
	ENST00000473961.6:c.81-2A>C
	ENST00000468300.5:c.81-2A>C
	ENST00000644555.2:c.-61-2A>C
	ENST00000477152.6:c.81-2A>C

Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic Likely pathogenic
Review star
Show details

Links

BRCA1

Type	Database	ID	Link
Gene	MIM	113705	OMIM
	HGNC	1100	HGNC
	Ensembl	ENSG00000012048	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC
	MONDO

Disease area statistics

[No Data.]

MGeND

[No Data.]

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Pathogenic	2014-06-11	no assertion criteria provided	hereditary breast ovarian cancer syndrome	germline	Detail
Pathogenic Likely pathogenic	2022-10-28	criteria provided, multiple submitters, no conflicts	not provided	germline	Detail
Pathogenic	2021-11-07	criteria provided, single submitter	Breast-ovarian cancer, familial, susceptibility to, 1	not applicable unknown	Detail
Likely pathogenic	2020-08-18	criteria provided, single submitter	Hereditary cancer-predisposing syndrome	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.420	Hereditary Breast and Ovarian Cancer Syndrome	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_007294.4(BRCA1):c.81-2A>C AND Hereditary breast ovarian cancer syndrome	ClinVar	Detail
NM_007294.4(BRCA1):c.81-2A>C AND not provided	ClinVar	Detail
NM_007294.4(BRCA1):c.81-2A>C AND Breast-ovarian cancer, familial, susceptibility to, 1	ClinVar	Detail
NM_007294.4(BRCA1):c.81-2A>C AND Hereditary cancer-predisposing syndrome	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs397509326 dbSNP
Genome: hg19
Position: chr17:41,267,798-41,267,798
Variant Type: snv
Reference Allele: T
Alternative Allele: G

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