chr5:1294955:C>T Detail (hg19) (TERT, LOC110806263)

Information

Genome

Assembly Position
hg19 chr5:1,294,955-1,294,955
hg38 chr5:1,294,840-1,294,840 View the variant detail on this assembly version.

HGVS

Type Transcript Protein
RefSeq NM_001193376.1:c.150G>A NP_001180305.1:p.Leu50=
NM_198253.2:c.150G>A NP_937983.2:p.Leu50=
Ensemble ENST00000334602.10:c.150G>A ENST00000334602.10:p.Leu50=
Summary

MGeND

Clinical significance not provided
Variant entry 1
GWAS entry
Disease area statistics Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance Conflicting classifications of pathogenicity
Review star
Show details
Links
Type Database ID Link
Gene MIM 187270 OMIM
HGNC 11730 HGNC
Ensembl ENSG00000164362 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC
MONDO
Disease area statistics
MGeND
Clinical significance Last evaluated Condition Origin Submission ID Submitter Institute Citation Comment Image
not provided sigmoid colon not provided MGS000042
(TMGS000093)
Hitoshi Nakagama National Cancer Center Japan
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Uncertain significance 2016-08-19 criteria provided, single submitter not provided germline Detail
Uncertain significance 2018-10-31 criteria provided, single submitter acute myeloid leukemia,Dyskeratosis congenita, autosomal dominant 1,aplastic anemia,Pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1,Dyskeratosis congenita, autosomal dominant 2,interstitial lung disease 2,Melanoma, cutaneous malignant, susceptibility to, 9 unknown Detail
Uncertain significance 2018-10-31 criteria provided, single submitter acute myeloid leukemia,Dyskeratosis congenita, autosomal dominant 1,aplastic anemia,Pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1,Dyskeratosis congenita, autosomal dominant 2,interstitial lung disease 2,Melanoma, cutaneous malignant, susceptibility to, 9 unknown Detail
Uncertain significance 2018-10-31 criteria provided, single submitter acute myeloid leukemia,Dyskeratosis congenita, autosomal dominant 1,aplastic anemia,Pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1,Dyskeratosis congenita, autosomal dominant 2,interstitial lung disease 2,Melanoma, cutaneous malignant, susceptibility to, 9 unknown Detail
Uncertain significance 2018-10-31 criteria provided, single submitter acute myeloid leukemia,Dyskeratosis congenita, autosomal dominant 1,aplastic anemia,Pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1,Dyskeratosis congenita, autosomal dominant 2,interstitial lung disease 2,Melanoma, cutaneous malignant, susceptibility to, 9 unknown Detail
Uncertain significance 2018-10-31 criteria provided, single submitter acute myeloid leukemia,Dyskeratosis congenita, autosomal dominant 1,aplastic anemia,Pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1,Dyskeratosis congenita, autosomal dominant 2,interstitial lung disease 2,Melanoma, cutaneous malignant, susceptibility to, 9 unknown Detail
Uncertain significance 2018-10-31 criteria provided, single submitter acute myeloid leukemia,Dyskeratosis congenita, autosomal dominant 1,aplastic anemia,Pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1,Dyskeratosis congenita, autosomal dominant 2,interstitial lung disease 2,Melanoma, cutaneous malignant, susceptibility to, 9 unknown Detail
Uncertain significance 2018-10-31 criteria provided, single submitter acute myeloid leukemia,Dyskeratosis congenita, autosomal dominant 1,aplastic anemia,Pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1,Dyskeratosis congenita, autosomal dominant 2,interstitial lung disease 2,Melanoma, cutaneous malignant, susceptibility to, 9 unknown Detail
Likely benign 2022-02-26 criteria provided, single submitter Hereditary cancer-predisposing syndrome,dyskeratosis congenita germline Detail
Likely benign 2022-02-26 criteria provided, single submitter Hereditary cancer-predisposing syndrome,dyskeratosis congenita germline Detail
Likely benign 2023-12-30 criteria provided, single submitter Dyskeratosis congenita, autosomal dominant 2,Idiopathic Pulmonary Fibrosis germline Detail
Likely benign 2023-12-30 criteria provided, single submitter Dyskeratosis congenita, autosomal dominant 2,Idiopathic Pulmonary Fibrosis germline Detail
Likely benign 2023-08-18 criteria provided, single submitter TERT-related disorder germline Detail
CIViC
[No Data.]
DisGeNET
[No Data.]
Annotation

Annotations

DescrptionSourceLinks
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND not provided ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND multiple conditions ClinVar Detail
NM_198253.3(TERT):c.150G>A (p.Leu50=) AND TERT-related disorder ClinVar Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs886044153 dbSNP
Genome
hg19
Position
chr5:1,294,955-1,294,955
Variant Type
snv
Reference Allele
C
Alternative Allele
T
Genome browser