SPATS1 spermatogenesis associated serine rich 1
Information
- Symbol
- SPATS1
- Type
- protein-coding
- Description
- spermatogenesis associated serine rich 1
- Entrez Gene ID
- 221409
- Genome
- hg19
- Position
- chr6:44,310,387-44,347,916
- Genome
- hg38
- Position
- chr6:44,342,650-44,380,179
- HGNC
- HGNC:22957 HGNC
- Ensembl
- ENSG00000249481 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Uncertain significance | 0 | 40 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
0 |
 |
40 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
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MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | DDIP |
| SYNONYM | SPATA8 |
| SYNONYM | SRSP1 |
| HGNC | HGNC:22957 HGNC |
| Ensembl | ENSG00000249481 Ensembl |
| AllianceGenome | HGNC:22957 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000674044.1 | hg38 | chr6 | 44,342,650 | 44,380,179 | 37,530 |
| ENST00000288390.2 | hg38 | chr6 | 44,342,749 | 44,377,167 | 34,419 |
| ENST00000323108.12 | hg38 | chr6 | 44,342,660 | 44,377,166 | 34,507 |
| ENST00000674044.1 | hg19 | chr6 | 44,310,387 | 44,347,916 | 37,530 |
| ENST00000323108.12 | hg19 | chr6 | 44,310,397 | 44,344,903 | 34,507 |
| ENST00000288390.2 | hg19 | chr6 | 44,310,486 | 44,344,904 | 34,419 |
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