SCML1 Scm polycomb group protein like 1
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 2 |
| Likely benign | 0 | 2 |
| not provided | 7 | 0 |
| Uncertain significance | 0 | 6 |
Ranking
| ClinVar | |
|---|---|
![]() |
0 |
![]() |
0 |
![]() |
0 |
![]() |
10 |
![]() |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| MIM | 300227 OMIM |
| HGNC | HGNC:10580 HGNC |
| Ensembl | ENSG00000047634 Ensembl |
| AllianceGenome | HGNC:10580 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000398080.5 | hg38 | chrX | 17,737,449 | 17,754,988 | 17,540 |
| ENST00000380045.7 | hg38 | chrX | 17,737,468 | 17,754,985 | 17,518 |
| ENST00000380041.8 | hg38 | chrX | 17,737,493 | 17,754,985 | 17,493 |
| ENST00000380043.7 | hg38 | chrX | 17,737,469 | 17,754,985 | 17,517 |
| ENST00000398080.5 | hg19 | chrX | 17,755,569 | 17,773,108 | 17,540 |
| ENST00000380045.7 | hg19 | chrX | 17,755,588 | 17,773,105 | 17,518 |
| ENST00000380043.7 | hg19 | chrX | 17,755,589 | 17,773,105 | 17,517 |
| ENST00000380041.8 | hg19 | chrX | 17,755,613 | 17,773,105 | 17,493 |
Genome browser




