ENST00000380041.8 SCML1

Information
Transcript ID
ENST00000380041.8
Genome
hg19
Position
chrX:17,755,613-17,773,105
Strand
+
CDS length
990
Amino acid length
330
Gene symbol
SCML1
Gene type
protein-coding
Gene description
Scm polycomb group protein like 1
Gene Entrez Gene ID
6322
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 17,755,613 17,755,800
2 17,762,191 17,762,339
3 17,763,576 17,763,659
4 17,764,138 17,764,218
5 17,767,520 17,767,624
6 17,768,014 17,768,413
7 17,769,935 17,770,086
8 17,771,378 17,773,105
CDS
Exon number Type Start Stop
2 CDS 17,762,307 17,762,339
3 CDS 17,763,576 17,763,659
4 CDS 17,764,138 17,764,218
5 CDS 17,767,520 17,767,624
6 CDS 17,768,014 17,768,413
7 CDS 17,769,935 17,770,086
8 CDS 17,771,378 17,771,512
Other genome
Genome Chromosome Start End Links
hg38 chrX 17,737,493 17,754,985 Link
CDS sequence
ATGATGTCTAACAGCTCCAGTGAAATCGATGTGATAAAAACAAGAATACCTACTTACGATGAAGATGACAACACTATTCTTTATGCGTATGAAACAAAACCTGAATTTGTCAATAAAGAACCGAATATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGATGATGTCCTTATTCATTGCCAGGTTATATATGATGCTCTGCAAAACCTGGATAAGAAGATTGATGTGATTCGTAGAAAGGTTTCAAAAATCCAACGTTTCCATGCGAGATCCCTGTGGACAAATCATAAGCGATATGGATATAAAAAGCATTCTTACCGGCTTGTTAAAAAGCTTAAACTCCAGAAAATGAAGAAAAATGAGGTTTACGAGACATTCTCCTACCCTGAAAGTTACAGCCCCACTTTACCAGTGTCAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGCGAGCTGAGCTGGAGGAGGACCCGATCCTCAGCCGCACTCCGAGTCCAGTGCATCCCTCAGATTTCTCTGAGCATAATTGTCAGCCGTATTATGCATCTGATGGTGCAACGTATGGTTCTTCTTCAGGGCTCTGCCTTGGCAACCCTCGGGCTGACAGCATCCACAACACTTACTCAACTGACCATGCTTCTGCAGCACCACCTTCAGTTACAAGGTCACCAGTTGAAAATGACGGTTACATAGAGGAAGGAAGCATCACTAAGCACCCTTCAACCTGGTCGGTGGAAGCAGTGGTCCTATTTCTAAAACAAACAGATCCTCTTGCATTATGCCCTCTTGTCGACCTCTTCAGAAGCCATGAAATTGACGGGAAGGCTCTGCTCCTACTCACGAGTGACGTGTTGCTGAAGCACTTGGGGGTGAAGCTGGGAACGGCTGTGAAGCTATGCTACTACATTGACCGACTTAAACAAGGAAAATGCTTTGAAAATTGA
Amino sequence
MMSNSSSEIDVIKTRIPTYDEDDNTILYAYETKPEFVNKEPNIVSDASCNTEEQLKTVDDVLIHCQVIYDALQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQKMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSPVHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLKQGKCFEN*