ENST00000380041.8 SCML1

Information
Transcript ID
ENST00000380041.8
Genome
hg38
Position
chrX:17,737,493-17,754,985
Strand
+
CDS length
990
Amino acid length
330
Gene symbol
SCML1
Gene type
protein-coding
Gene description
Scm polycomb group protein like 1
Gene Entrez Gene ID
6322
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 17,737,493 17,737,680
2 17,744,071 17,744,219
3 17,745,456 17,745,539
4 17,746,018 17,746,098
5 17,749,400 17,749,504
6 17,749,894 17,750,293
7 17,751,815 17,751,966
8 17,753,258 17,754,985
CDS
Exon number Type Start Stop
2 CDS 17,744,187 17,744,219
3 CDS 17,745,456 17,745,539
4 CDS 17,746,018 17,746,098
5 CDS 17,749,400 17,749,504
6 CDS 17,749,894 17,750,293
7 CDS 17,751,815 17,751,966
8 CDS 17,753,258 17,753,392
Other genome
Genome Chromosome Start End Links
hg19 chrX 17,755,613 17,773,105 Link
CDS sequence
ATGATGTCTAACAGCTCCAGTGAAATCGATGTGATAAAAACAAGAATACCTACTTACGATGAAGATGACAACACTATTCTTTATGCGTATGAAACAAAACCTGAATTTGTCAATAAAGAACCGAATATTGTATCTGACGCATCCTGTAATACTGAAGAGCAACTGAAGACAGTTGATGATGTCCTTATTCATTGCCAGGTTATATATGATGCTCTGCAAAACCTGGATAAGAAGATTGATGTGATTCGTAGAAAGGTTTCAAAAATCCAACGTTTCCATGCGAGATCCCTGTGGACAAATCATAAGCGATATGGATATAAAAAGCATTCTTACCGGCTTGTTAAAAAGCTTAAACTCCAGAAAATGAAGAAAAATGAGGTTTACGAGACATTCTCCTACCCTGAAAGTTACAGCCCCACTTTACCAGTGTCAAGGCGTGAGAATAATTCCCCGAGCAACCTTCCAAGGCCATCCTTTTGCATGGAAGAATACCAGCGAGCTGAGCTGGAGGAGGACCCGATCCTCAGCCGCACTCCGAGTCCAGTGCATCCCTCAGATTTCTCTGAGCATAATTGTCAGCCGTATTATGCATCTGATGGTGCAACGTATGGTTCTTCTTCAGGGCTCTGCCTTGGCAACCCTCGGGCTGACAGCATCCACAACACTTACTCAACTGACCATGCTTCTGCAGCACCACCTTCAGTTACAAGGTCACCAGTTGAAAATGACGGTTACATAGAGGAAGGAAGCATCACTAAGCACCCTTCAACCTGGTCGGTGGAAGCAGTGGTCCTATTTCTAAAACAAACAGATCCTCTTGCATTATGCCCTCTTGTCGACCTCTTCAGAAGCCATGAAATTGACGGGAAGGCTCTGCTCCTACTCACGAGTGACGTGTTGCTGAAGCACTTGGGGGTGAAGCTGGGAACGGCTGTGAAGCTATGCTACTACATTGACCGACTTAAACAAGGAAAATGCTTTGAAAATTGA
Amino sequence
MMSNSSSEIDVIKTRIPTYDEDDNTILYAYETKPEFVNKEPNIVSDASCNTEEQLKTVDDVLIHCQVIYDALQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQKMKKNEVYETFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSPVHPSDFSEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVENDGYIEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKHLGVKLGTAVKLCYYIDRLKQGKCFEN*