ENST00000503842.5 PRDM2

Information
Transcript ID
ENST00000503842.5
Genome
hg38
Position
chr1:13,749,435-13,823,499
Strand
+
CDS length
189
Amino acid length
63
Gene symbol
PRDM2
Gene type
protein-coding
Gene description
PR/SET domain 2
Gene Entrez Gene ID
7799
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 13,749,435 13,749,487
2 13,769,118 13,769,173
3 13,773,078 13,773,188
4 13,816,427 13,816,570
5 13,823,159 13,823,499
CDS
Exon number Type Start Stop
3 CDS 13,773,170 13,773,188
4 CDS 13,816,427 13,816,570
5 CDS 13,823,159 13,823,184
Other genome
Genome Chromosome Start End Links
hg19 chr1 14,075,930 14,149,994 Link
CDS sequence
ATGAGAGATTCTGCAGAAGCTACAGCCTCCGCTTGGCGTCCCGATGCTCTCCACCAGCGGCCCCGTACATCACCAGGCAGTATAGGAAGGTCAAAGCTCCAGCTGCAGCCCAGTTCCAGGGACCATTCTTCAAAGAGTAGACACTCTGGCTGCTCCCTGACAGCACCTGAAGTGACCTGGAATCAGTGA
Amino sequence
MRDSAEATASAWRPDALHQRPRTSPGSIGRSKLQLQPSSRDHSSKSRHSGCSLTAPEVTWNQ*