ENST00000503842.5 PRDM2

Information
Transcript ID
ENST00000503842.5
Genome
hg19
Position
chr1:14,075,930-14,149,994
Strand
+
CDS length
189
Amino acid length
63
Gene symbol
PRDM2
Gene type
protein-coding
Gene description
PR/SET domain 2
Gene Entrez Gene ID
7799
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 14,075,930 14,075,982
2 14,095,613 14,095,668
3 14,099,573 14,099,683
4 14,142,922 14,143,065
5 14,149,654 14,149,994
CDS
Exon number Type Start Stop
3 CDS 14,099,665 14,099,683
4 CDS 14,142,922 14,143,065
5 CDS 14,149,654 14,149,679
Other genome
Genome Chromosome Start End Links
hg38 chr1 13,749,435 13,823,499 Link
CDS sequence
ATGAGAGATTCTGCAGAAGCTACAGCCTCCGCTTGGCGTCCCGATGCTCTCCACCAGCGGCCCCGTACATCACCAGGCAGTATAGGAAGGTCAAAGCTCCAGCTGCAGCCCAGTTCCAGGGACCATTCTTCAAAGAGTAGACACTCTGGCTGCTCCCTGACAGCACCTGAAGTGACCTGGAATCAGTGA
Amino sequence
MRDSAEATASAWRPDALHQRPRTSPGSIGRSKLQLQPSSRDHSSKSRHSGCSLTAPEVTWNQ*