HMGA1 high mobility group AT-hook 1

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
Locus Zoom
Variants
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Information

Symbol: HMGA1
Type: protein-coding
Description: high mobility group AT-hook 1
Entrez Gene ID: 3159
Genome: hg19
Position: chr6:34,204,650-34,214,008
Genome: hg38
Position: chr6:34,236,873-34,246,231
MIM: 600701 OMIM
HGNC: HGNC:5010 HGNC
Ensembl: ENSG00000137309 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Benign	0	4
Likely benign	0	2
Uncertain significance	0	4

Ranking

	ClinVar
	0
	0
	0
	10
	0

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

[No Data.]

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
Category	:
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
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Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	HMG-R
SYNONYM	HMGA1A
SYNONYM	HMGIY
MIM	600701 OMIM
HGNC	HGNC:5010 HGNC
Ensembl	ENSG00000137309 Ensembl
AllianceGenome	HGNC:5010

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000401473.7	hg38	chr6	34,236,873	34,246,231	9,359
ENST00000374116.3	hg38	chr6	34,238,791	34,246,230	7,440
ENST00000311487.9	hg38	chr6	34,236,873	34,246,231	9,359
ENST00000447654.5	hg38	chr6	34,236,873	34,246,230	9,358
ENST00000703808.1	hg38	chr6	34,236,920	34,244,979	8,060
ENST00000703809.1	hg38	chr6	34,240,737	34,246,230	5,494
ENST00000347617.10	hg38	chr6	34,236,873	34,246,231	9,359
ENST00000447654.5	hg19	chr6	34,204,650	34,214,007	9,358
ENST00000311487.9	hg19	chr6	34,204,650	34,214,008	9,359
ENST00000347617.10	hg19	chr6	34,204,650	34,214,008	9,359
ENST00000401473.7	hg19	chr6	34,204,650	34,214,008	9,359
ENST00000703808.1	hg19	chr6	34,204,697	34,212,756	8,060
ENST00000374116.3	hg19	chr6	34,206,568	34,214,007	7,440
ENST00000703809.1	hg19	chr6	34,208,514	34,214,007	5,494

Key	Value
strand	+
start	34,204,576
Gene Symbol	HMGA1
Entrez GeneId	3,159
Chr Band	6p21
end	34,214,007
chr	chr6
Name	high mobility group AT-hook 1

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